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LipidXplorer Wiki

News

2011-12-14 LipidXplorer Version 1.2.2 released

The recent version of LipidXplorer can be downloaded at [LipidXplorer on Sourceforge]. There can be found also an update in form of a *.zip file.

See LipidXplorer Version 1.2.2 for infos.

2011-08-05 LipidXplorer Version 1.2.1 released

The recent version of LipidXplorer can be downloaded at [LipidXplorer on Sourceforge]. There can be found also an update in form of a *.zip file.

Important bugfixes were done on the MFQL language and the MS/MS averaging algorithm. Now both work better! Please update!

2011-07-22 LipidXplorer Version 1.2 released

The new version of LipidXplorer can be downloaded at [LipidXplorer on Sourceforge].

It includes all new features from 2010-10-11.

LipidXplorer Documentation

MFQL library

Frequently Asked Questions (FAQ)

LXMerge: A tool for merging multiple results

Get LipidXplorer

LipidXplorer is published under GPL and available here: [LipidXplorer on Sourceforge]. Check out the LipidXplorer installation instructions for help.

Articles using LipidXplorer

Herzog, R., Schwudke, D., Schuhmann, K., Sampaio, J.L., Bornstein, S.R., Schroeder, M., and Shevchenko, A. 2011. A novel informatics concept for high-throughput shotgun lipidomics based on the molecular fragmentation query language. Genome Biol 12(1): R8.

Penkov S, Mende F, Zagoriy V, Erkut C, Martin R, Pässler U, Schuhmann K, Schwudke D, Gruner M, Mäntler J, Reichert-Müller T, Shevchenko A, Knölker HJ, Kurzchalia TV. 2010. Maradolipids: diacyltrehalose glycolipids specific to dauer larva in Caenorhabditis elegans. Angew Chem Int Ed Engl. 49(49):9430-5.

Graessler J, Schwudke D, Schwarz PE, Herzog R, Shevchenko A, Bornstein SR: Top-down lipidomics reveals ether lipid deficiency in blood plasma of hypertensive patients. PLoS One 2009, 4:e6261.

Contact

For any questions and suggestions please put them on the [LipidXplorer Google Group]

If you want to contribute to the Wiki please write to herzog@mpi-cbg.de or also to the google group.

Known bugs

Please check out the [LipidXplorer Google Group] to be up-to-date on found bugs.

Bug reports

Please send Bug reports directly to herzog@mpi-cbg.de

Example spectra

Example spectra for the LipidXplorer tutorial

• Spectra of E.coli acquired on the LTQ Orbitrap with different resolution settings:File:Spectra tutorial.zip

All spectra used in the LipidXplorer article

• Spectra of E.coli and bovine heart acquired on LTQ Orbitrap XL, LTQ Orbitrap Velos and ABI QStar pulsar (in DDA and MPIS mode):File:Spectra article.zip