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| − | [[LX Reference Herzog | Herzog, | + | [[LX Reference Herzog 2012 | Ronny Herzog, Kai Schuhmann, Dominik Schwudke, Julio L. Sampaio, Stefan R. Bornstein, Michael Schroeder, Andrej Shevchenko. '''LipidXplorer: A Software for Consensual Cross-Platform Lipidomics''' ''PLoS ONE 7(1): e29851. doi:10.1371/journal.pone.0029851'']] |
| − | [[LX Reference | + | [[LX Reference Gerl | Gerl MJ, Sampaio JL, Urban S, Kalvodova L, Verbavatz JM, Binnington B, Lindemann D, Lingwood CA, Shevchenko A, Schroeder C, Simons K. '''Quantitative analysis of the lipidomes of the influenza virus envelope and MDCK cell apical membrane.''' ''J Cell Biol. 2012 Jan 16. [Epub ahead of print]'']] |
| − | [[LX Reference | + | [[LX Reference Ayciriex | Ayciriex S, Le Guédard M, Camougrand N, Velours G, Schoene M, Leone S, Wattelet-Boyer V, Dupuy JW, Shevchenko A, Schmitter JM, Lessire R, Bessoule JJ, Testet E. '''YPR139c/LOA1 encodes a novel lysophosphatidic acid acyltransferase associated with lipid droplets and involved in TAG homeostasis.''' ''Mol Biol Cell. 2012 Jan;23(2):233-246. Epub 2011 Nov 16.'']] |
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Revision as of 15:21, 18 January 2012
LipidXplorer Wiki
News
2012-01-17 New LipidXplorer paper published
We are happy to announce the recent publication about LipidXplorers newly implemented support for precursor ion / neutral loss scanned (PIS/NLS) spectra on triple quad mass spectrometers. Now it supports the whole range of major mass spectra technologies which is used in shotgun lipidomics. Here is a link to the article: LipidXplorer: A Software for Consensual Cross-Platform Lipidomics
2012-01-13 Bug found in LipidXplorer Version 1.2.2
Attention: A bug occurred in the file lpdxGUI.pyw when spectra are converted with the option "mc.wiff". The "Thinking..." dialog won't disappear and the Debug window contains an error message with the last line saying: "NameError: global name 'rawOut' is not defined". Please use msconvert manually for conversion of *.wiff files to *.mzXML. In the next version of LipidXplorer this bug will be fixed.
2011-12-14 LipidXplorer Version 1.2.2 released
The recent version of LipidXplorer can be downloaded at LipidXplorer on Sourceforge. There can be found also an update in form of a *.zip file.
See LipidXplorer Version 1.2.2 for infos.
LipidXplorer Documentation
MFQL library
Frequently Asked Questions (FAQ)
LXMerge: A tool for merging multiple results
Get LipidXplorer
LipidXplorer is published under GPL and available here: [LipidXplorer on Sourceforge]. Check out the LipidXplorer installation instructions for help.
Contact
For any questions and suggestions please put them on the [LipidXplorer Google Group]
If you want to contribute to the Wiki please write to herzog@mpi-cbg.de or also to the google group.
Known bugs
Please check out the [LipidXplorer Google Group] to be up-to-date on found bugs.
Bug reports
Please send Bug reports directly to herzog@mpi-cbg.de
Example spectra
Example spectra for the LipidXplorer tutorial
- Spectra of E.coli acquired on the LTQ Orbitrap with different resolution settings:File:Spectra tutorial.zip
All spectra used in the LipidXplorer article
- Spectra of E.coli and bovine heart acquired on LTQ Orbitrap XL, LTQ Orbitrap Velos and ABI QStar pulsar (in DDA and MPIS mode):File:Spectra article.zip
