Difference between revisions of "MFQL library"
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===MFQL used in '''[3]''' for identification of Lipids in human blood plasma=== | ===MFQL used in '''[3]''' for identification of Lipids in human blood plasma=== | ||
+ | |||
+ | In this zip file: [[File:Mfql_screens_MS-only_positive.zip|Positive MS only screens]] the following queries can be found which were used in '''[3]''': | ||
+ | * Ceramide | ||
+ | * Cholesterylester | ||
+ | * Diacylglycerols | ||
+ | * Glucosylceramide | ||
+ | * GPL-diether | ||
+ | * Lysophosphatidylcholine (LPC) | ||
+ | * Lysophosphatidylethanolamine (LPE) | ||
+ | * Phosphatidylcholine (PC) | ||
+ | * Phosphatidylcholine ether (PC-O) | ||
+ | * Phosphatidylethanolamine (PE) | ||
+ | * Phosphatidylethanolamine ether (PE-O) | ||
+ | * Phosphatidylinositol (PI) | ||
+ | * Phosphatidylserine (PS) | ||
+ | * Sphingomyline (SM) | ||
+ | * Triacylglycerols (TAG) | ||
----- | ----- |
Revision as of 14:25, 14 February 2011
Contents
MFQL used in [1] for lipid identification in E.coli
- Phosphatidylethanolamine in negative mode: File:PE negative FAS.mfql
- Lyso-Phosphatidylethanolamine in negative mode: File:LPE negative FAS.mfql
- Phosphatidylglycerol in negative mode: File:PG negative FAS.mfql
- Phosphatidylinositol in negative mode: File:PI negative FAS.mfql
- Phosphatidylserine in negative mode: File:PS negative FAS.mfql
- Phosphatic acid in negative mode: File:PA negative FAS.mfql
MFQL used in [1] for lipid identification in bovine heart
- Phosphatidylethanolamine in negative mode: File:Neg bovine heart PE.mfql
- Lyso-Phosphatidylethanolamine in negative mode: File:Neg bovine heart LPE.mfql
- Phosphatidylethanolamine ether in negative mode: File:Neg bovine heart PEO.mfql
- Phosphatidylcholine in negative mode: File:Neg bovine heart PC.mfql
- Lyso-Phosphatidylcholine in negative mode: File:Neg bovine heart LPC.mfql
- Phosphatidylcholine ether in negative mode: File:Neg bovine heart PCO.mfql
- Phosphatic acid in negative mode: File:Neg bovine heart PA.mfql
- Lyso-Phosphatic acid in negative mode: File:Neg bovine heart LPA.mfql
- Phosphatidylglycerol in negative mode: File:Neg bovine heart PG.mfql
- Lyso-Phosphatidylglycerol in negative mode: File:Neg bovine heart LPG.mfql
- Phosphatidylinositol in negative mode: File:Neg bovine heart PI.mfql
- Lyso-Phosphatidylinositol in negative mode: File:Neg bovine heart LPI.mfql
- Sphingomylien in negative mode: File:Neg bovine heart LPI.mfql
- Ceramide in negative mode: File:Neg bovine heart DAG.mfql
- Diacylglycerol in negative mode: File:Neg bovine heart DAG.mfql
- Triacylglycerol in negative mode: File:Neg bovine heart TAG.mfql
- Cardiolipin in negative mode: File:Neg bovine heart CL.mfql
MFQL used in [2] for identification of Maradolipids in Dauer Larva in Caenorhabditis elegans
- Maradolipids in negative ion mode: File:Maradolipid.mfql
MFQL used in [3] for identification of Lipids in human blood plasma
In this zip file: File:Mfql screens MS-only positive.zip the following queries can be found which were used in [3]:
- Ceramide
- Cholesterylester
- Diacylglycerols
- Glucosylceramide
- GPL-diether
- Lysophosphatidylcholine (LPC)
- Lysophosphatidylethanolamine (LPE)
- Phosphatidylcholine (PC)
- Phosphatidylcholine ether (PC-O)
- Phosphatidylethanolamine (PE)
- Phosphatidylethanolamine ether (PE-O)
- Phosphatidylinositol (PI)
- Phosphatidylserine (PS)
- Sphingomyline (SM)
- Triacylglycerols (TAG)
References
[1] Herzog, R., Schwudke, D., Schuhmann, K., Sampaio, J.L., Bornstein, S.R., Schroeder, M., and Shevchenko, A. 2011. A novel informatics concept for high-throughput shotgun lipidomics based on the molecular fragmentation query language. Genome Biol 12(1): R8.
[2]Penkov S, Mende F, Zagoriy V, Erkut C, Martin R, Pässler U, Schuhmann K, Schwudke D, Gruner M, Mäntler J, Reichert-Müller T, Shevchenko A, Knölker HJ, Kurzchalia TV. 2010. Maradolipids: diacyltrehalose glycolipids specific to dauer larva in Caenorhabditis elegans. Angew Chem Int Ed Engl. 49(49):9430-5.
[3] Graessler J, Schwudke D, Schwarz PE, Herzog R, Shevchenko A, Bornstein SR: Top-down lipidomics reveals ether lipid deficiency in blood plasma of hypertensive patients. PLoS One 2009, 4:e6261.